Occurrence record: CLIOC:IOCL 3358

LivingSpecimen of Euglenozoa recorded on 2011-08-17

API

Dataset

Data partner	Fundação Oswaldo Cruz
Data resource	Fiocruz/CLIOC - Coleção de Leishmania
institutionCode	Fundação Oswaldo Cruz Supplied institution code "Fundação Oswaldo Cruz (Fiocruz)"
collectionCode	Coleção de Leishmania Supplied collection code "CLIOC"
catalogNumber	IOCL 3358
otherCatalogNumbers
occurrenceID	BR:Fiocruz:IOCL:3358
basisOfRecord	Living specimen
preparations	[DOC:POP-LRNTL-018]
identifiedBy	Elisa Cupolillo
Identified date	2011-11-09
Collector	Lourdes Maria Garcez dos Santos - 122
recordNumber	S85
License	CC-BY-NC
Rightsholder	Coleção de Leishmania (CLIOC)
samplingProtocol	Biópsia de LC
associatedTaxa	Homem
occurrenceStatus	present
Abcd identification qualifier	Not provided
dateIdentified	2011-11-09

Event

Occurrence date	2011-08-17 Supplied as year:2011 month:08 day:17
samplingProtocol	Biópsia de LC
Date precision	Day

Taxonomy

scientificName	Euglenozoa Supplied scientific name "Leishmania sp."
taxonRank	phylum Supplied as "genus"
Kingdom	Protozoa Supplied as "Protozoário"
Phylum	Euglenozoa
class	Kinetoplastea
Order	Trypanosomatida
Family	Trypanosomatidae
Genus	Leishmania
Species	Leishmania sp.
associatedTaxa	Homem
Taxonomic issue	No issues
Name match metric	Higher taxon match The match is based on the higher level classification.
Name parse type	INFORMAL

Geospatial

Country	Brasil
State or Territory	Para Supplied as: "Pará"
locality	Igarapé do Lama
decimalLatitude	-2.450629
decimalLongitude	-54.700924
geodeticDatum	EPSG:4326
county	Santarém
verbatimLongitude	-54.70092300
verbatimLatitude	-2.45062900

User flagged issues

Data quality tests

Test name	Result
Kingdom not recognised	Failed
Collector name unparseable	Warning
Occurrence status assumed to be present	Warning
Name not in national checklists	Warning
Coordinates derived from verbatim coordinates	Warning
Show/Hide 29 passed properties
Basis of record not supplied	Passed
Basis of record badly formed	Passed
Invalid collection date	Passed
Incomplete collection date	Passed
Identification date before occurrence date	Passed
First of the month	Passed
Missing name of person who identified the specimen/observation	Passed
Missing identification date	Passed
Missing catalogue number	Passed
Data are generalised	Passed
Collection code not recognised	Passed
Institution code not recognised	Passed
Missing taxonomic rank	Passed
Name not supplied	Passed
Name not recognised	Passed
Invalid scientific name	Passed
Unparseable verbatim coordinates	Passed
Coordinates are transposed	Passed
Coordinates are out of range for species	Passed
Supplied coordinates are zero	Passed
Zero latitude	Passed
Zero longitude	Passed
Supplied country not recognised	Passed
Location not supplied	Passed
Country inferred from coordinates	Passed
Supplied coordinates centre of state	Passed
Coordinates centre of country	Passed
Missing geodetic datum	Passed
Coordinates dont match supplied state	Passed
Show/Hide 10 missing properties
Missing an identification qualifier	Missing
Missing identification references	Missing
Decimal coordinates not supplied	Missing
Missing coordinate precision	Missing
Coordinate uncertainty not specified	Missing
Missing name of person who georeferenced the occurrence	Missing
Missing georeferenced protocol	Missing
Missing georeferenced sources	Missing
Missing georeferenced verification status	Missing
Missing georeference date	Missing
Show/Hide 42 tests that have not been run
Habitat incorrect for species	Unchecked (lack of data)
First of the century	Unchecked (lack of data)
Coordinates converted to WGS84	Unchecked (lack of data)
Date precision invalid	Unchecked (lack of data)
First of the year	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Longitude is negated	Unchecked (lack of data)
No collection date supplied	Unchecked (lack of data)
Unable to convert UTM coordinates	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Latitude Longitude calculated from grid reference	Unchecked (lack of data)
Decimal latitude/longitude conversion failed	Unchecked (lack of data)
Geodetic datum assumed WGS84	Unchecked (lack of data)
unrecognisedOccurrenceStatus	Unchecked (lack of data)
Precision / range mismatch	Unchecked (lack of data)
Outside expert range for species	Unchecked (lack of data)
Depth out of range	Unchecked (lack of data)
Homonym issues with supplied name	Unchecked (lack of data)
Coordinates dont match supplied country	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Georeferenced after occurrence date	Unchecked (lack of data)
Coordinates converted from UTM	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Latitude is negated	Unchecked (lack of data)
Media unrepresentative	Unchecked (lack of data)
Invalid geodetic datum	Unchecked (lack of data)
Coordinate uncertainty not valid	Unchecked (lack of data)
Image URL invalid	Unchecked (lack of data)
Higher taxonomy missing	Unchecked (lack of data)
Cultivated / escapee	Unchecked (lack of data)
Coordinate precision not valid	Unchecked (lack of data)
Media unrepresentative for taxon	Unchecked (lack of data)
Unrecognized geodetic datum	Unchecked (lack of data)
Resource taxonomic scope mismatch	Unchecked (lack of data)
Coordinate precision and uncertainty transposed	Unchecked (lack of data)
Badly formed altitude	Unchecked (lack of data)
Day and month transposed	Unchecked (lack of data)
Type status not recognised	Unchecked (lack of data)
Possible duplicate record	Unchecked (lack of data)
Altitude out of range	Unchecked (lack of data)

Additional political boundaries information

ANA \| Bacias hidrográficas do Brasil	RIO AMAZONAS
ANA \| Divisão Hidrográfica Nacional - Macro Região Hidrográfica	AMAZONICA
ANA \| Divisão Hidrográfica Nacional - Meso Região Hidrográfica	Xingu
ANA \| Divisão Hidrográfica Nacional - Micro Região Hidrográfica	Curua-Una
DNAEE \| Sub-bacias Hidrográficas	Tapajos
IBGE \| Biomas do Brasil (2022)	Amazonia
IBGE \| Domínios morfoestruturais do Brasil (2021)	Bacias e Coberturas Sedimentares Fanerozoicas
IBGE \| Estados do Brasil	Para
IBGE \| Folhas da Carta Internacional do Mundo, ao Milionésimo (IBGE)	Para
IBGE \| Folhas da Carta Internacional do Mundo, ao Milionésimo (IBGE)	Pará
IBGE \| Limite da Amazônia Legal (2020)	1
IBGE \| Limite do Bioma Amazônia (2022)	Amazonia
IBGE \| Limite do Brasil	1
IBGE \| Municípios do Brasil (2022)	Santarem
IBGE \| Pedologia do Brasil (2021)	ARGISSOLO
IBGE \| Regiões do Brasil	Norte
MMA \| Áreas prioritárias para conservação da Amazônia (2022)	Extremamente alta
MMA \| Áreas prioritárias para conservação da Amazônia (MMA, 2018)	AMZ-567
Municípios do Brasil	SANTAREM
WWF \| Ecorregiões de Água Doce (2008)	316
WWF \| Ecorregiões marinhas mundiais (2007)	Amazonia
WWF \| Ecorregiões terrestres mundiais (2001)	Tapajos-Xingu moist forests

Group	Field Name	Original Value	Processed Value
Classification	Name parse type		INFORMAL
	Name match metric		higherMatch
	scientificName	Leishmania sp.	Euglenozoa
	class	Kinetoplastea
	taxonConceptID		395723
	Kingdom id		395722
	Left		568066
	phylum	Euglenozoa	Euglenozoa
	kingdom	Protozoário	Protozoa
	genus	Leishmania
	Phylum id		395723
	order	Trypanosomatida
	taxonRank	genus	phylum
	specificEpithet	sp.
	Taxonomic issue		["noIssue"]
	family	Trypanosomatidae
	Taxon rank id		2000
	Right		568066
Event	Date precision		Day
	eventDate		2011-08-17
	year	2011	2011
	day	17	17
	month	08	08
Identification	Abcd identification qualifier		Not provided
	dateIdentified	2011-11-09	2011-11-09
	identificationQualifier		Not provided
	identifiedBy	Elisa Cupolillo
Occurrence	occurrenceID	BR:Fiocruz:IOCL:3358
	basisOfRecord	LivingSpecimen	LivingSpecimen
	recordedBy	Lourdes Maria Garcez dos Santos - 122
	modified	2022-09-23	2022-09-23
	Rightsholder	Coleção de Leishmania (CLIOC)
	samplingProtocol	Biópsia de LC
	associatedTaxa	Homem
	recordNumber	S85
	otherCatalogNumbers	<br />
	institutionCode	Fundação Oswaldo Cruz (Fiocruz)
	occurrenceStatus		present
	preparations	[DOC:POP-LRNTL-018]
	catalogNumber	IOCL 3358
	collectionCode	CLIOC
Attribution	Collection uid		co42
	Data resource		Fiocruz/CLIOC - Coleção de Leishmania
	Institution uid		in4
	Collection name		Coleção de Leishmania
	Data provider uid		dp4
	Institution name		Fundação Oswaldo Cruz
	license		CC-BY-NC
	Provenance		Published dataset
	Data resource uid	dr706
	Data partner		Fundação Oswaldo Cruz
Location	decimalLatitude		-2.450629
	country	Brasil	Brasil
	county	Santarém
	stateProvince	Pará	Para
	decimalLongitude		-54.700924
	locality	Igarapé do Lama
	geodeticDatum		EPSG:4326
	verbatimLongitude	-54.70092300
	verbatimLatitude	-2.45062900

Occurrence record: CLIOC:IOCL 3358

Dataset

Event

Taxonomy

Geospatial

User flagged issues

Data quality tests

Additional political boundaries information

- flagged by