Occurrence record: KC990849

MaterialSample of Human betaherpesvirus 5 recorded on 2010-01-01

API

Dataset

Data partner	Dados repatriados Portal GBIF - ocorrência no Brasil
Data resource	GBIF repatriados \| Espécimes repatriados da base de dados do National Center for Biotechnology Information
institutionCode	Supplied institution code "INSDC"
occurrenceID	KC990849
basisOfRecord	MaterialSample Supplied basis "materialSample"
Collector	Wagatsuma, V. Virginia Supplied as "Virginia Wagatsuma"
license	CC-BY 4.0 (Int) Supplied as CC_BY_4_0
occurrenceStatus	present
Abcd identification qualifier	Not provided

Event

Occurrence date	2010-01-01 Supplied date "2010-01-01T00:00:00Z"
Date precision	Day

Taxonomy

scientificName	Human betaherpesvirus 5
taxonRank	SPECIES
Kingdom	Viruses
Order	Herpesvirales
Family	Herpesviridae
Genus	Cytomegalovirus
Taxonomic issue	No issues
Name match metric	No match
Name parse type	VIRUS

Geospatial

Country	Brasil
State or Territory	Sao Paulo
locality	Brazil
Latitude	-21.1
Longitude	-47.48
geodeticDatum	EPSG:4326
coordinatePrecision	Unknown
countryCode	BR

User flagged issues

Data quality tests

Test name	Result
Name not recognised	Failed
First of the month	Warning
First of the year	Warning
Occurrence status assumed to be present	Warning
Geodetic datum assumed WGS84	Warning
Country inferred from coordinates	Warning
Show/Hide 21 passed properties
Basis of record not supplied	Passed
Basis of record badly formed	Passed
Invalid collection date	Passed
Incomplete collection date	Passed
First of the century	Passed
Collector name unparseable	Passed
Data are generalised	Passed
Missing taxonomic rank	Passed
Name not supplied	Passed
Kingdom not recognised	Passed
Invalid scientific name	Passed
Decimal coordinates not supplied	Passed
Coordinates are transposed	Passed
Coordinates are out of range for species	Passed
Supplied coordinates are zero	Passed
Zero latitude	Passed
Zero longitude	Passed
Location not supplied	Passed
Supplied coordinates centre of state	Passed
Coordinates centre of country	Passed
Missing geodetic datum	Passed
Show/Hide 12 missing properties
Missing an identification qualifier	Missing
Missing name of person who identified the specimen/observation	Missing
Missing identification references	Missing
Missing identification date	Missing
Missing catalogue number	Missing
Missing coordinate precision	Missing
Coordinate uncertainty not specified	Missing
Missing name of person who georeferenced the occurrence	Missing
Missing georeferenced protocol	Missing
Missing georeferenced sources	Missing
Missing georeferenced verification status	Missing
Missing georeference date	Missing
Show/Hide 47 tests that have not been run
Coordinates dont match supplied state	Unchecked (lack of data)
Habitat incorrect for species	Unchecked (lack of data)
unrecognisedOccurrenceStatus	Unchecked (lack of data)
Latitude Longitude calculated from grid reference	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Altitude out of range	Unchecked (lack of data)
Unable to convert UTM coordinates	Unchecked (lack of data)
Media unrepresentative	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Coordinate uncertainty not valid	Unchecked (lack of data)
Coordinates converted from UTM	Unchecked (lack of data)
Coordinate precision not valid	Unchecked (lack of data)
No collection date supplied	Unchecked (lack of data)
Image URL invalid	Unchecked (lack of data)
Name not in national checklists	Unchecked (lack of data)
Coordinates converted to WGS84	Unchecked (lack of data)
Supplied country not recognised	Unchecked (lack of data)
Unrecognized geodetic datum	Unchecked (lack of data)
Depth out of range	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Precision / range mismatch	Unchecked (lack of data)
Unparseable verbatim coordinates	Unchecked (lack of data)
Collection code not recognised	Unchecked (lack of data)
Media unrepresentative for taxon	Unchecked (lack of data)
Institution code not recognised	Unchecked (lack of data)
Identification date before occurrence date	Unchecked (lack of data)
Type status not recognised	Unchecked (lack of data)
Day and month transposed	Unchecked (lack of data)
Longitude is negated	Unchecked (lack of data)
Georeferenced after occurrence date	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Outside expert range for species	Unchecked (lack of data)
Coordinate precision and uncertainty transposed	Unchecked (lack of data)
Badly formed altitude	Unchecked (lack of data)
Homonym issues with supplied name	Unchecked (lack of data)
Coordinates derived from verbatim coordinates	Unchecked (lack of data)
Invalid geodetic datum	Unchecked (lack of data)
Latitude is negated	Unchecked (lack of data)
Cultivated / escapee	Unchecked (lack of data)
Resource taxonomic scope mismatch	Unchecked (lack of data)
Decimal latitude/longitude conversion failed	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Coordinates dont match supplied country	Unchecked (lack of data)
Date precision invalid	Unchecked (lack of data)
Higher taxonomy missing	Unchecked (lack of data)
Possible duplicate record	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)

Additional political boundaries information

ANA \| Bacias hidrográficas do Brasil	RIO PARANA
ANA \| Divisão Hidrográfica Nacional - Macro Região Hidrográfica	PARANA
ANA \| Divisão Hidrográfica Nacional - Meso Região Hidrográfica	Grande
ANA \| Divisão Hidrográfica Nacional - Micro Região Hidrográfica	Pardo (SP)
DNAEE \| Sub-bacias Hidrográficas	Grande
IBGE \| Biomas do Brasil (2022)	Cerrado
IBGE \| Domínios morfoestruturais do Brasil (2021)	Depositos Sedimentares Quaternarios
IBGE \| Estados do Brasil	Sao Paulo
IBGE \| Folhas da Carta Internacional do Mundo, ao Milionésimo (IBGE)	Sao Paulo
IBGE \| Folhas da Carta Internacional do Mundo, ao Milionésimo (IBGE)	São Paulo
IBGE \| Limite do Bioma Cerrado (2022)	Cerrado
IBGE \| Limite do Brasil	1
IBGE \| Municípios do Brasil (2022)	Altinopolis
IBGE \| Pedologia do Brasil (2021)	LATOSSOLO
IBGE \| Regiões Fitoecológicas do Brasil (2021)	Formacao Pioneira com influencia fluvial e/ou lacustre
IBGE \| Regiões do Brasil	Sudeste
INPE \| Ecorregiões no Bioma Cerrado (2021)	Basaltos do Parana
Limite do Bioma Cerrado	Cerrado
Municípios do Brasil	ALTINOPOLIS
WWF \| Ecorregiões de Água Doce (2008)	344
WWF \| Ecorregiões marinhas mundiais (2007)	Southeastern Brazil
WWF \| Ecorregiões terrestres mundiais (2001)	Cerrado

Group	Field Name	Original Value	Processed Value
Classification	Name parse type		VIRUS
	Name match metric		noMatch
	scientificName	Human betaherpesvirus 5
	kingdom	Viruses
	genus	Cytomegalovirus
	order	Herpesvirales
	taxonRank	SPECIES
	Taxonomic issue		["noIssue"]
	family	Herpesviridae
Event	Date precision		Day
	eventDate	2010-01-01T00:00:00Z	2010-01-01
	year	2010	2010
	day	1	1
	month	1	01
Identification	Abcd identification qualifier		Not provided
Identification	identificationQualifier		Not provided
Occurrence	occurrenceID	KC990849
	basisOfRecord	materialSample	MaterialSample
	recordedBy	Virginia Wagatsuma	Wagatsuma, V. Virginia
	institutionCode	INSDC
	occurrenceStatus		present
Attribution	Data resource		GBIF repatriados \| Espécimes repatriados da base de dados do National Center for Biotechnology Information
	Data provider uid		dp10
	license	CC_BY_4_0	CC-BY 4.0 (Int)
	Provenance		Published dataset
	Data resource uid	dr382
	Data partner		Dados repatriados Portal GBIF - ocorrência no Brasil
Location	decimalLatitude	-21.1	-21.1
	country		Brasil
	stateProvince		Sao Paulo
	decimalLongitude	-47.48	-47.48
	locality	Brazil
	geodeticDatum		EPSG:4326
	countryCode	BR

Occurrence record: KC990849

Dataset

Event

Taxonomy

Geospatial

User flagged issues

Data quality tests

Additional political boundaries information

- flagged by