Occurrence record: RBdna:RBdna00418470

MaterialSample of Psychotria brasiliensis recorded on 2005-04-13

API

Dataset

Data partner	Instituto de Pesquisas Jardim Botânico do Rio de Janeiro
Data resource	Rio de Janeiro Botanical Garden DNA Collection - GGBN extensions
institutionCode	Instituto de Pesquisas Jardim Botânico do Rio de Janeiro Supplied institution code "JBRJ"
collectionCode	Banco de DNA de Espécies da Flora Brasileira Supplied collection code "RBdna"
catalogNumber	RBdna00418470
otherCatalogNumbers	1841
occurrenceID	urn:catalog:JBRJ:RBdna:418470
basisOfRecord	MaterialSample
preparations	CTAB 2%
Collector	Cardoso, S. Sérgio\|Elisângela Supplied as "Sérgio Cardoso; Elisângela"
License	CC-BY
disposition	in collection
occurrenceStatus	present
Abcd identification qualifier	Not provided

Event

Occurrence date	2005-04-13 Supplied as year:2005 month:4 day:13
Date precision	Day

Taxonomy

higherClassification	Plantae, RUBIACEAE, Psychotria
scientificName	Psychotria brasiliensis
taxonRank	species Supplied as "specie"
Kingdom	Plantae
Phylum	Tracheophyta
class	Magnoliopsida
Order	Gentianales
Family	Rubiaceae
Genus	Psychotria
Species	Psychotria brasiliensis
Taxonomic issue	No issues
Name match metric	Exact match The supplied name matched the name exactly.
Name parse type	SCIENTIFIC
scientificNameAuthorship	Vell.

Geospatial

higherGeography	Brasil, Rio de Janeiro, Angra dos Reis
Country	Brasil
State or Territory	Rio de Janeiro
locality	Trilha da Jararaca partindo de Dois Rios, Ilha Grande, RJ.
county	Angra dos Reis

Additional properties

materialSampleID	urn:catalog:JBRJ:RBdna:418470

User flagged issues

Data quality tests

Test name	Result
Occurrence status assumed to be present	Warning
Name not in national checklists	Warning
Show/Hide 19 passed properties
Basis of record not supplied	Passed
Basis of record badly formed	Passed
Invalid collection date	Passed
Incomplete collection date	Passed
First of the month	Passed
Collector name unparseable	Passed
Missing catalogue number	Passed
Data are generalised	Passed
Collection code not recognised	Passed
Institution code not recognised	Passed
Missing taxonomic rank	Passed
Name not supplied	Passed
Kingdom not recognised	Passed
Name not recognised	Passed
Invalid scientific name	Passed
Location not supplied	Passed
Country inferred from coordinates	Passed
Supplied coordinates centre of state	Passed
Coordinates centre of country	Passed
Show/Hide 11 missing properties
Missing an identification qualifier	Missing
Missing name of person who identified the specimen/observation	Missing
Missing identification references	Missing
Missing identification date	Missing
Decimal coordinates not supplied	Missing
Missing geodetic datum	Missing
Missing name of person who georeferenced the occurrence	Missing
Missing georeferenced protocol	Missing
Missing georeferenced sources	Missing
Missing georeferenced verification status	Missing
Missing georeference date	Missing
Show/Hide 54 tests that have not been run
Coordinates dont match supplied state	Unchecked (lack of data)
Habitat incorrect for species	Unchecked (lack of data)
Latitude Longitude calculated from grid reference	Unchecked (lack of data)
Altitude out of range	Unchecked (lack of data)
First of the year	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Badly formed altitude	Unchecked (lack of data)
Unable to convert UTM coordinates	Unchecked (lack of data)
Coordinates derived from verbatim coordinates	Unchecked (lack of data)
Identification date before occurrence date	Unchecked (lack of data)
Coordinates converted from UTM	Unchecked (lack of data)
Georeferenced after occurrence date	Unchecked (lack of data)
Decimal latitude/longitude conversion failed	Unchecked (lack of data)
Longitude is negated	Unchecked (lack of data)
Zero latitude	Unchecked (lack of data)
Possible duplicate record	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Coordinate precision and uncertainty transposed	Unchecked (lack of data)
No collection date supplied	Unchecked (lack of data)
Coordinate precision not valid	Unchecked (lack of data)
Image URL invalid	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Outside expert range for species	Unchecked (lack of data)
Missing coordinate precision	Unchecked (lack of data)
Resource taxonomic scope mismatch	Unchecked (lack of data)
Coordinate uncertainty not specified	Unchecked (lack of data)
Media unrepresentative	Unchecked (lack of data)
Coordinates are transposed	Unchecked (lack of data)
Cultivated / escapee	Unchecked (lack of data)
Coordinates dont match supplied country	Unchecked (lack of data)
Higher taxonomy missing	Unchecked (lack of data)
Day and month transposed	Unchecked (lack of data)
Type status not recognised	Unchecked (lack of data)
Zero longitude	Unchecked (lack of data)
Precision / range mismatch	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
First of the century	Unchecked (lack of data)
Invalid geodetic datum	Unchecked (lack of data)
Coordinates are out of range for species	Unchecked (lack of data)
Unrecognized geodetic datum	Unchecked (lack of data)
Coordinates converted to WGS84	Unchecked (lack of data)
Coordinate uncertainty not valid	Unchecked (lack of data)
Supplied coordinates are zero	Unchecked (lack of data)
Homonym issues with supplied name	Unchecked (lack of data)
Supplied country not recognised	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
Date precision invalid	Unchecked (lack of data)
Geodetic datum assumed WGS84	Unchecked (lack of data)
Unparseable verbatim coordinates	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Latitude is negated	Unchecked (lack of data)
Depth out of range	Unchecked (lack of data)
Media unrepresentative for taxon	Unchecked (lack of data)
unrecognisedOccurrenceStatus	Unchecked (lack of data)

Group	Field Name	Original Value	Processed Value
Classification	Name parse type		SCIENTIFIC
	Species		Psychotria brasiliensis
	Name match metric		exactMatch
	scientificName	Psychotria brasiliensis	Psychotria brasiliensis
	class		Magnoliopsida
	Genus id		279734
	taxonConceptID		367150
	Kingdom id		395630
	Left		62399
	phylum		Tracheophyta
	kingdom	Plantae	Plantae
	Class id		395632
	genus	Psychotria	Psychotria
	Phylum id		395631
	order		Gentianales
	taxonRank	specie	species
	specificEpithet	brasiliensis
	Order id		395662
	Taxonomic issue		["noIssue"]
	Species id		367150
	Family id		364643
	higherClassification	Plantae, RUBIACEAE, Psychotria
	family	RUBIACEAE	Rubiaceae
	Taxon rank id		7000
	scientificNameAuthorship	Vell.
	Right		62399
Event	Date precision		Day
	eventDate		2005-04-13
	year	2005	2005
	day	13	13
	month	4	04
Identification	Abcd identification qualifier		Not provided
Identification	identificationQualifier		Not provided
Occurrence	occurrenceID	urn:catalog:JBRJ:RBdna:418470
	disposition	in collection
	basisOfRecord	MaterialSample	MaterialSample
	recordedBy	Sérgio Cardoso; Elisângela	Cardoso, S. Sérgio\|Elisângela
	otherCatalogNumbers	1841
	institutionCode	JBRJ
	occurrenceStatus		present
	preparations	CTAB 2%
	catalogNumber	RBdna00418470
	collectionCode	RBdna
Attribution	Collection uid		co510
	Data resource		Rio de Janeiro Botanical Garden DNA Collection - GGBN extensions
	Institution uid		in5
	Collection name		Banco de DNA de Espécies da Flora Brasileira
	Data provider uid		dp8
	Institution name		Instituto de Pesquisas Jardim Botânico do Rio de Janeiro
	license		CC-BY
	Provenance		Published dataset
	Data resource uid	dr837
	Data partner		Instituto de Pesquisas Jardim Botânico do Rio de Janeiro
Location	higherGeography	Brasil, Rio de Janeiro, Angra dos Reis
	country	Brasil	Brasil
	county	Angra dos Reis
	stateProvince	Rio de Janeiro
	locality	Trilha da Jararaca partindo de Dois Rios, Ilha Grande, RJ.

Occurrence record: RBdna:RBdna00418470

Dataset

Event

Taxonomy

Geospatial

Additional properties

User flagged issues

Data quality tests

- flagged by