Occurrence record: BRAZIL:PREVIR:21MT1R00001:RECTAL_SWAB

MaterialSample of Calomys | Rato recorded on 2021-07-10

API

Dataset

Data partner	Rede de Vigilância de Vírus (PREVIR) do MCTI
Data resource	Monitoramento de fauna da Rede Nacional de Vigilância de vírus em animais silvestres (PREVIR-MCTI). Observatório de Morcegos no Pantanal (MT-1)
institutionCode	Supplied institution code "INPP/MCTI"
occurrenceID	BRAZIL:PREVIR:21MT1R00001:RECTAL_SWAB
basisOfRecord	MaterialSample
preparations	Meios das Amostras: PBS, VTM \| Método de Preservação: Congelamento \| Agente de Resfriamento: Nitrogênio \| Preparada por: Juliane Saldanha Da Silva
identifiedBy	Thiago Borges Semedo Fernandes
Identified date	2021-07-10
Collector	Thiago Borges Semedo Fernandes
sex	Fêmea
lifeStage	Adulto
License	CC-BY-NC 4.0 (Int) Supplied as CC BY-NC 4.0
fieldNumber	JS182
Rightsholder	Previr-MCTI-CNPq-403761/2020-4
samplingProtocol	Método de Captura: Busca Ativa \| Tipo de Captura: Coletado
datasetName	Monitoramento de Fauna do Projeto Rede de Vigilância de Vírus (Previr). Observatório Pantanal Morcegos MT-1
language	pt
establishmentMeans	Nativa
dynamicProperties	{"headBodyLengthInMilimeters":99.0,"tailLengthInMilimeters":37.7,"earLengthInMilimeters":18.38,"footLengthInMilimeters":22.1,"weightInGrams":41.0,"symptomaticCondition":"Não Aplicável"}
occurrenceStatus	present
Abcd identification qualifier	Not provided
dateIdentified	2021-07-10

Event

fieldNumber	JS182
Occurrence date	2021-07-10
samplingProtocol	Método de Captura: Busca Ativa \| Tipo de Captura: Coletado
Date precision	Day

Taxonomy

scientificName	Calomys
taxonRank	genus
Common name	Rato
Kingdom	Animalia
Phylum	Chordata
class	Mammalia
Order	Rodentia
Family	Cricetidae
Genus	Calomys
Taxonomic issue	No issues
Name match metric	Exact match The supplied name matched the name exactly.
Name parse type	SCIENTIFIC

Geospatial

Country	Brasil
State or Territory	Mato Grosso
locality	Pousada Pouso Alegre
habitat	Abrigo Em Barracão
decimalLatitude	-16.503380584790914
decimalLongitude	-56.74535206602085
geodeticDatum	EPSG:4326
coordinatePrecision	Unknown
county	Poconé

Additional properties

materialSampleID	Swab Anal

User flagged issues

Data quality tests

Test name	Result
Occurrence status assumed to be present	Warning
Name not in national checklists	Warning
Geodetic datum assumed WGS84	Warning
Show/Hide 29 passed properties
Basis of record not supplied	Passed
Basis of record badly formed	Passed
Invalid collection date	Passed
Incomplete collection date	Passed
Identification date before occurrence date	Passed
First of the month	Passed
Cultivated / escapee	Passed
Missing name of person who identified the specimen/observation	Passed
Missing identification date	Passed
Collector name unparseable	Passed
Data are generalised	Passed
Missing taxonomic rank	Passed
Name not supplied	Passed
Kingdom not recognised	Passed
Name not recognised	Passed
Invalid scientific name	Passed
Decimal coordinates not supplied	Passed
Coordinates are transposed	Passed
Coordinates are out of range for species	Passed
Supplied coordinates are zero	Passed
Zero latitude	Passed
Zero longitude	Passed
Supplied country not recognised	Passed
Location not supplied	Passed
Country inferred from coordinates	Passed
Supplied coordinates centre of state	Passed
Coordinates centre of country	Passed
Missing geodetic datum	Passed
Coordinates dont match supplied state	Passed
Show/Hide 10 missing properties
Missing an identification qualifier	Missing
Missing identification references	Missing
Missing catalogue number	Missing
Missing coordinate precision	Missing
Coordinate uncertainty not specified	Missing
Missing name of person who georeferenced the occurrence	Missing
Missing georeferenced protocol	Missing
Missing georeferenced sources	Missing
Missing georeferenced verification status	Missing
Missing georeference date	Missing
Show/Hide 44 tests that have not been run
Habitat incorrect for species	Unchecked (lack of data)
Institution code not recognised	Unchecked (lack of data)
Type status not recognised	Unchecked (lack of data)
Unparseable verbatim coordinates	Unchecked (lack of data)
Resource taxonomic scope mismatch	Unchecked (lack of data)
Altitude value supplied in feet	Unchecked (lack of data)
Coordinates converted to WGS84	Unchecked (lack of data)
Higher taxonomy missing	Unchecked (lack of data)
Image URL invalid	Unchecked (lack of data)
Date precision invalid	Unchecked (lack of data)
unrecognisedOccurrenceStatus	Unchecked (lack of data)
Coordinate uncertainty not valid	Unchecked (lack of data)
Min and max altitude reversed	Unchecked (lack of data)
No collection date supplied	Unchecked (lack of data)
Depth value supplied in feet	Unchecked (lack of data)
Coordinates converted from UTM	Unchecked (lack of data)
Depth out of range	Unchecked (lack of data)
Unrecognized geodetic datum	Unchecked (lack of data)
Media unrepresentative	Unchecked (lack of data)
Outside expert range for species	Unchecked (lack of data)
First of the year	Unchecked (lack of data)
Precision / range mismatch	Unchecked (lack of data)
Badly formed altitude	Unchecked (lack of data)
Homonym issues with supplied name	Unchecked (lack of data)
Invalid geodetic datum	Unchecked (lack of data)
Latitude is negated	Unchecked (lack of data)
Coordinate precision not valid	Unchecked (lack of data)
Altitude value non-numeric	Unchecked (lack of data)
Latitude Longitude calculated from grid reference	Unchecked (lack of data)
Day and month transposed	Unchecked (lack of data)
First of the century	Unchecked (lack of data)
Possible duplicate record	Unchecked (lack of data)
Coordinate precision and uncertainty transposed	Unchecked (lack of data)
Altitude out of range	Unchecked (lack of data)
Depth value non-numeric	Unchecked (lack of data)
Unable to convert UTM coordinates	Unchecked (lack of data)
Georeferenced after occurrence date	Unchecked (lack of data)
Min and max depth reversed	Unchecked (lack of data)
Media unrepresentative for taxon	Unchecked (lack of data)
Longitude is negated	Unchecked (lack of data)
Coordinates dont match supplied country	Unchecked (lack of data)
Decimal latitude/longitude conversion failed	Unchecked (lack of data)
Coordinates derived from verbatim coordinates	Unchecked (lack of data)
Collection code not recognised	Unchecked (lack of data)

Additional political boundaries information

ANA \| Bacias hidrográficas do Brasil	RIO PARANA
ANA \| Divisão Hidrográfica Nacional - Macro Região Hidrográfica	PARAGUAI
ANA \| Divisão Hidrográfica Nacional - Meso Região Hidrográfica	Alto Paraguai
ANA \| Divisão Hidrográfica Nacional - Micro Região Hidrográfica	Pantanal Noroeste
DNAEE \| Sub-bacias Hidrográficas	Alto Paraguai
IBGE \| Biomas do Brasil (2022)	Pantanal
IBGE \| Domínios morfoestruturais do Brasil (2021)	Depositos Sedimentares Quaternarios
IBGE \| Estados do Brasil	Mato Grosso
IBGE \| Folhas da Carta Internacional do Mundo, ao Milionésimo (IBGE)	Mato Grosso
IBGE \| Folhas da Carta Internacional do Mundo, ao Milionésimo (IBGE)	Mato Grosso
IBGE \| Limite da Amazônia Legal (2020)	1
IBGE \| Limite do Bioma Pantanal (2022)	Pantanal
IBGE \| Limite do Brasil	1
IBGE \| Municípios do Brasil (2022)	Pocone
IBGE \| Pedologia do Brasil (2021)	PLANOSSOLO
IBGE \| Regiões Fitoecológicas do Brasil (2021)	Savana-Estepica Gramineo-Lenhosa sem palmeiras e sem floresta-de-galeria
IBGE \| Regiões do Brasil	Centro-Oeste
INPE \| Não floresta Amazônia Legal (2023)	NAO_FLORESTA
MMA \| Áreas prioritárias para conservação do Cerrado e Pantanal (2022)	Muito Alta
MMA \| Áreas prioritárias para conservação do Cerrado e Pantanal (MMA, 2018)	168
Municípios do Brasil	POCONE
WWF \| Ecorregiões de Água Doce (2008)	343
WWF \| Ecorregiões terrestres mundiais (2001)	Pantanal

Group	Field Name	Original Value	Processed Value
Classification	Name parse type		SCIENTIFIC
	Name match metric		exactMatch
	vernacularName	Rato
	scientificName	Calomys	Calomys
	class	Mammalia	Mammalia
	Genus id		188630
	taxonConceptID		188630
	Kingdom id		395634
	Left		538925
	phylum	Chordata	Chordata
	kingdom	Animalia	Animalia
	Class id		239610
	genus	Calomys	Calomys
	Phylum id		239567
	order	Rodentia	Rodentia
	taxonRank	genus	genus
	Order id		208008
	Taxonomic issue		["noIssue"]
	Family id		157617
	family	Cricetidae	Cricetidae
	Taxon rank id		6000
	Right		538939
Event	Date precision		Day
	eventDate	2021-07-10	2021-07-10
	year		2021
	day		10
	month		07
Identification	Abcd identification qualifier		Not provided
	dateIdentified	2021-07-10	2021-07-10
	identificationQualifier		Not provided
	identifiedBy	Thiago Borges Semedo Fernandes
Occurrence	occurrenceID	BRAZIL:PREVIR:21MT1R00001:RECTAL_SWAB
	basisOfRecord	MaterialSample	MaterialSample
	recordedBy	Thiago Borges Semedo Fernandes	Thiago Borges Semedo Fernandes
	sex	Fêmea
	modified	2021-09-03T13:55:59.653Z	2021-09-03
	fieldNumber	JS182
	Rightsholder	Previr-MCTI-CNPq-403761/2020-4
	samplingProtocol	Método de Captura: Busca Ativa \| Tipo de Captura: Coletado
	datasetName	Monitoramento de Fauna do Projeto Rede de Vigilância de Vírus (Previr). Observatório Pantanal Morcegos MT-1
	language	pt
	establishmentMeans	Nativa
	institutionCode	INPP/MCTI
	dynamicProperties	{"headBodyLengthInMilimeters":99.0,"tailLengthInMilimeters":37.7,"earLengthInMilimeters":18.38,"footLengthInMilimeters":22.1,"weightInGrams":41.0,"symptomaticCondition":"Não Aplicável"}
	lifeStage	Adulto
	occurrenceStatus		present
	preparations	Meios das Amostras: PBS, VTM \| Método de Preservação: Congelamento \| Agente de Resfriamento: Nitrogênio \| Preparada por: Juliane Saldanha Da Silva
Attribution	Data resource		Monitoramento de fauna da Rede Nacional de Vigilância de vírus em animais silvestres (PREVIR-MCTI). Observatório de Morcegos no Pantanal (MT-1)
	Data provider uid		dp36
	license	CC BY-NC 4.0	CC-BY-NC 4.0 (Int)
	Data resource uid	dr640
	Data partner		Rede de Vigilância de Vírus (PREVIR) do MCTI
Location	decimalLatitude	-16.503380584790914	-16.503380584790914
	country	Brasil	Brasil
	county	Poconé
	habitat	Abrigo Em Barracão	Abrigo Em Barracão
	stateProvince	Mato Grosso	Mato Grosso
	decimalLongitude	-56.74535206602085	-56.74535206602085
	locality	Pousada Pouso Alegre
	geodeticDatum		EPSG:4326

Occurrence record: BRAZIL:PREVIR:21MT1R00001:RECTAL_SWAB

Dataset

Event

Taxonomy

Geospatial

Additional properties

User flagged issues

Data quality tests

Additional political boundaries information

- flagged by